Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015867618.1_cds_XP_016433173.1_29350
CDS Infomation

[gene=LOC107759696] [db_xref=GeneID:107759696] [protein=fimbrin-2-like] [protein_id=XP_016433173.1] [location=complement(join(9859..10041,10359..10450,11234..11330,11980..12137,12226..12425,12644..12799,13387..13598,14023..14139,14235..14303,14517..14555,15195..15366,15459..15700,16590..16751))] [gbkey=CDS]
Sequence

ATGAAGAAAGAGAACGGAGGTCTGACGCTCGCCGACTTGCCTTCACAAATGGCGAAACTG
AAACACGTCGGAGAGAATCTTACTGAGCAAGACAGAGAGTTGTTTCTCAGAGATTCCTAT
AAATGTTTGGATGAAGACGTTGATTTCGAACTATTTCTTCGGGTTTATTTGAAACTCCAA
GCACATGCCACAGCAAGAATGGGAAATAGCGCCAAGAATTCATCAGCTTTCCTAAAGTCT
CCAACTTCTACGCTACTCCACACAATTAGTGAATCCGAGAAGGCGTCATATGTTGCCCAT
ATTAACAACTATCTTGCAGAAGATGAATTTTTGAAAAAATTCCTTCCTATTGATCCTTCT
ACTAACGATCTCTTTGAGGTTGCCAAGGACGGAGTTCTTATCTGCAAGCTTATCAATGTG
GCCGTACCTGGAACAATTGATGAACGAGCAGTAAATATGAAGAGAATGCTTAATCCATGG
GAAAGGAATGAAAATCATACATTGTGCCTAAACTCTGCCAAGGCAATTGGATGTACTGTG
GTCAATATTGGGACTCAAGACTTCATTGAAGGGAGGAGGCATCTTGTTCTTGGAGTAATA
TCTCAAATTATTAAAATTCAACTATTGGCAGACCTCAATCTAAAGAAAACACCTCAATTG
GTCGAGTTAGTTGACGATAGCCAGGAAGTAGAGGAGCTGATGAGCCTTCCTCCAGAAAAG
ATCCTGCTTAGATGGATGAATTTTCAATTGAAGAAATCTGGATACAAGAAAATCGTGACA
AACTTCTCTTCTGACATAAAGGATGGAGAAGCTTATGCTCACCTCCTAAATGTACTAGCC
CCTGAGTATACCAATCCTTCAACGCTCACTGTGAGAGACCCTTTAGGAAGAGCAAAATTG
GTTCTGGAACATGCAGATATGATGGGCTGCAAAAGATATTTAACAGCGAAAGATATTGTG
GAAGGTTCCCCAAATCTTAACCTTGCATTTGTGGCACATATCTTTCAGCATAGGAATGGT
CTTTCAATCCAAACAAAGCAGATATCCTTTGTTGAGATATCACCAGATGAAGCTCAGATG
TCCAGGGAAGAAAGATCATTTCGCTTTTGGATCAATAGTCTTGGAAATTCATCATACATA
GACAATGTTTTCGAAGATCTGAGAGATGGATGGGTGCTTTTGGAGACACTTGACAAGGTC
TCCCCAGGAATTGTTAATTGGAAAATTGCCACTAAACCTCCAATTAAGATGCCTTTTAGA
AAAGTAGAAAACTGCAACCAAGTAGTCAAGATTGGCAAACAATTGAAGTTTTCCTTAGTA
AATATTGCTGGAAATGACGTTGTGCAGGGAAACAAGAAGTTAATATTGGCTTACTTGTGG
CAGTTAATGAGATGTAACATGCTTCAGCTCTTAAAGAATTTGAGATTTCACTCCCATGGG
AAGGAAATTACCGACGCCCACATTTTAGAGTGGGCTAACAGCAAAGTAAGAAACTCAGGA
AGCCAGAGTCATATGGCAAGTTTTAAGGATAAGAGTTTGTCAACTGGAATCTTTTTCCTT
GAACTGCTAAGTTCTGTTCACCCTCGAGCTGTTAACTGGAGTCTTGTTACAAAAGGGGAA
ACTGATGAGCAGAAGAAAATGAACGCGACCTACATAATCAGTATCGCGAGAAAGCTCGGA
TGTTCAATATTTTTGTTACCTGAAGATTTAATTGAGGTAAATCAAAAGATGATCCTTACG
CTGACAGCAAGTATAATGTATTGGCATTTGAAACAACCATTGGAGGACCAAACTTTTGCA
TCATCGGATAGTGATAGTAGCTCGGTGGACACAGCCTCAACCTCAACGTTGGACGATACA
GCTTCTGAGTCTTCAGCGGATGATATTAGTAACAGATAA

Peptide Sequence

PEP ID

XP_016433173.1
PEP Infomation

PREDICTED: fimbrin-2-like [Nicotiana tabacum]
Sequence

MKKENGGLTLADLPSQMAKLKHVGENLTEQDRELFLRDSYKCLDEDVDFELFLRVYLKLQ
AHATARMGNSAKNSSAFLKSPTSTLLHTISESEKASYVAHINNYLAEDEFLKKFLPIDPS
TNDLFEVAKDGVLICKLINVAVPGTIDERAVNMKRMLNPWERNENHTLCLNSAKAIGCTV
VNIGTQDFIEGRRHLVLGVISQIIKIQLLADLNLKKTPQLVELVDDSQEVEELMSLPPEK
ILLRWMNFQLKKSGYKKIVTNFSSDIKDGEAYAHLLNVLAPEYTNPSTLTVRDPLGRAKL
VLEHADMMGCKRYLTAKDIVEGSPNLNLAFVAHIFQHRNGLSIQTKQISFVEISPDEAQM
SREERSFRFWINSLGNSSYIDNVFEDLRDGWVLLETLDKVSPGIVNWKIATKPPIKMPFR
KVENCNQVVKIGKQLKFSLVNIAGNDVVQGNKKLILAYLWQLMRCNMLQLLKNLRFHSHG
KEITDAHILEWANSKVRNSGSQSHMASFKDKSLSTGIFFLELLSSVHPRAVNWSLVTKGE
TDEQKKMNATYIISIARKLGCSIFLLPEDLIEVNQKMILTLTASIMYWHLKQPLEDQTFA
SSDSDSSSVDTASTSTLDDTASESSADDISNR

Transcript Sequence

Gene sequence data has not been registered.